EnhancerDB
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  3. rs28393114[chr16:16054784]
Enhancers that have rs28393114[chr16:16054784]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 16045445 16094717 enh3913
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28393114[chr16:16054784]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 16054777 16054790 ELF1 JASPAR yes 9755854
chr16 16054781 16054786 ETS2 TRANSFAC yes 9755855
chr16 16054781 16054789 FEV JASPAR yes 9755856
chr16 16054781 16055251 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21694224
chr16 16054781 16055251 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108185230
chr16 16054782 16054789 SPI1 JASPAR yes 9755857
Genes associated with rs28393114[chr16:16054784], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More