EnhancerDB
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  3. rs28403990[chr16:29278246]
Enhancers that have rs28403990[chr16:29278246]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29265834 29287135 enh31760
Astrocyte Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs28403990[chr16:29278246]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29278227 29278247 ESR1 JASPAR yes 10255836
chr16 29278231 29278249 ESR2 JASPAR yes 10255837
chr16 29278232 29278247 ESR2 JASPAR yes 10255840
chr16 29278232 29278252 ESR1 JASPAR yes 10255841
chr16 29278240 29278248 NR4A2 JASPAR yes 10255842
Genes associated with rs28403990[chr16:29278246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More