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- rs28409082[chr19:3429247]
Enhancers that have rs28409082[chr19:3429247]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
3426225 |
3432638 |
enh17864 |
|
|
Transcript factors that have rs28409082[chr19:3429247]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
3428939
|
3429649
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108366957
|
|
|
chr19
|
3429089
|
3430483
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108366959
|
|
|
chr19
|
3429099
|
3430644
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108366960
|
|
|
chr19
|
3429229
|
3429250
|
IRF1
|
JASPAR
|
yes
|
|
112130999
|
|
|
chr19
|
3429230
|
3429251
|
IRF1
|
JASPAR
|
yes
|
|
112131001
|
|
|
chr19
|
3429232
|
3429247
|
FOXP1
|
JASPAR
|
yes
|
|
112131003
|
|
|
chr19
|
3429238
|
3429249
|
FOXC1
|
JASPAR
|
yes
|
|
112131004
|
|
|
chr19
|
3429245
|
3429256
|
FOXB1
|
JASPAR
|
yes
|
|
112131005
|
|
Genes associated with rs28409082[chr19:3429247], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |