EnhancerDB
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  3. rs28414775[chr12:50953330]
Enhancers that have rs28414775[chr12:50953330]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs28414775[chr12:50953330]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50953322 50953334 TAL1 JASPAR yes 120843781
chr12 50953323 50953335 NHLH1 JASPAR yes 120843782
chr12 50953324 50953334 TFAP4 JASPAR yes 120843783
Genes associated with rs28414775[chr12:50953330], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More