EnhancerDB
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  3. rs28417106[chr15:55574616]
Enhancers that have rs28417106[chr15:55574616]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 55567262 55578776 enh31390
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Astrocyte Blood (GM12878) Stomach Colon (HCT116) Breast Uterus Peripheral Blood (MM.1S) Adrenal Lung (PC-9) Pancreas Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs28417106[chr15:55574616]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 55574375 55574891 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21654646
chr15 55574375 55574891 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108139868
chr15 55574424 55574974 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21654647
chr15 55574424 55574974 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108139869
chr15 55574448 55574904 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21654648
chr15 55574448 55574904 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108139870
chr15 55574455 55574851 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21654649
chr15 55574455 55574851 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108139871
chr15 55574614 55574625 DMRT3 JASPAR yes 23499269
Genes associated with rs28417106[chr15:55574616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More