EnhancerDB
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  3. rs28419505[chr17:56415297]
Enhancers that have rs28419505[chr17:56415297]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56410845 56419415 enh4498
Liver (HepG2) Epithelial (MCF-7) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs28419505[chr17:56415297]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275032
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275033
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275034
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275035
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275036
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275037
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774005
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275067
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275068
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275069
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275070
chr17 56414303 56415305 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774035
chr17 56414521 56415733 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774039
chr17 56414863 56415379 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774046
chr17 56415016 56415452 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774049
chr17 56415023 56415323 ZNF274 GTRD no Liver (HepG2) 21774050
chr17 56415036 56415717 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774051
chr17 56415051 56415487 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774053
chr17 56415067 56415387 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774054
chr17 56415119 56415369 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774055
chr17 56415143 56415796 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774056
chr17 56415166 56415436 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774057
chr17 56415196 56415610 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774058
chr17 56415221 56415597 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774059
chr17 56415245 56415463 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774060
chr17 56415247 56416059 ZBTB7A UCSC Txn Factor no Conserved 108275126
chr17 56415247 56416059 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275127
chr17 56415250 56415576 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774061
chr17 56415253 56415469 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774062
chr17 56415259 56415695 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774063
chr17 56415267 56415597 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774064
chr17 56415270 56415726 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774065
chr17 56415291 56415587 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774066
chr17 56415292 56415303 USF1 JASPAR yes 55012970
chr17 56415292 56415303 USF2 JASPAR yes 55012971
chr17 56415294 56415704 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774067
chr17 56415297 56415561 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774068
Genes associated with rs28419505[chr17:56415297], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More