EnhancerDB
  1. Home
  2. SNP
  3. rs28434552[chr19:2543163]
Enhancers that have rs28434552[chr19:2543163]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2521384 2555115 enh4959
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28434552[chr19:2543163]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 21836499
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 108361562
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 108361563
chr19 2540326 2544542 ZNF274 GTRD no Cervix (HeLa-S3) 108361564
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 21836500
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 108361565
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 108361566
chr19 2540333 2544227 TCF7L2 GTRD no Colon (HCT116) 108361567
chr19 2541769 2544238 ZNF274 GTRD no Blood (GM12878) 108361847
chr19 2541769 2544238 ZNF274 GTRD no Blood (GM12878) 108361848
chr19 2542207 2544218 ZNF274 GTRD no Liver (HepG2) 21836754
chr19 2542207 2544218 ZNF274 GTRD no Liver (HepG2) 108361849
chr19 2542207 2544218 ZNF274 GTRD no Liver (HepG2) 108361850
chr19 2542237 2544706 ZNF274 GTRD no Cervix (HeLa-S3) 21836755
chr19 2542237 2544706 ZNF274 GTRD no Cervix (HeLa-S3) 108361851
chr19 2542237 2544706 ZNF274 GTRD no Cervix (HeLa-S3) 108361852
chr19 2542249 2544098 ZNF274 GTRD no Liver (HepG2) 21836756
chr19 2542249 2544098 ZNF274 GTRD no Liver (HepG2) 108361853
chr19 2542249 2544098 ZNF274 GTRD no Liver (HepG2) 108361854
chr19 2542287 2544128 ZNF274 GTRD no Cervix (HeLa-S3) 21836757
chr19 2542287 2544128 ZNF274 GTRD no Cervix (HeLa-S3) 108361855
chr19 2542287 2544128 ZNF274 GTRD no Cervix (HeLa-S3) 108361856
chr19 2542330 2544576 ZNF274 GTRD no Liver (HepG2) 21836758
chr19 2542330 2544576 ZNF274 GTRD no Liver (HepG2) 108361857
chr19 2542330 2544576 ZNF274 GTRD no Liver (HepG2) 108361858
chr19 2542348 2544120 ZNF274 GTRD no Liver (HepG2) 21836759
chr19 2542348 2544120 ZNF274 GTRD no Liver (HepG2) 108361859
chr19 2542348 2544120 ZNF274 GTRD no Liver (HepG2) 108361860
chr19 2542437 2544450 ZNF274 GTRD no Bone Marrow (K562) 21836760
chr19 2542437 2544450 ZNF274 GTRD no Bone Marrow (K562) 108361861
chr19 2542437 2544450 ZNF274 GTRD no Bone Marrow (K562) 108361862
chr19 2542918 2544533 ZNF143 GTRD no Epithelial (MCF-7) 21836761
chr19 2542918 2544533 ZNF143 GTRD no Epithelial (MCF-7) 108361863
chr19 2542918 2544533 ZNF143 GTRD no Epithelial (MCF-7) 108361864
chr19 2542979 2544185 ZNF274 GTRD no Liver (HepG2) 21836762
chr19 2542979 2544185 ZNF274 GTRD no Liver (HepG2) 108361865
chr19 2542979 2544185 ZNF274 GTRD no Liver (HepG2) 108361866
chr19 2543006 2544040 ZNF274 GTRD no Liver (HepG2) 21836763
chr19 2543006 2544040 ZNF274 GTRD no Liver (HepG2) 108361867
chr19 2543065 2544490 ZNF274 GTRD no Liver (HepG2) 21836764
chr19 2543065 2544490 ZNF274 GTRD no Liver (HepG2) 108361868
chr19 2543065 2544490 ZNF274 GTRD no Liver (HepG2) 108361869
chr19 2543097 2544126 ZNF274 GTRD no Liver (HepG2) 21836765
chr19 2543097 2544126 ZNF274 GTRD no Liver (HepG2) 108361870
chr19 2543097 2544126 ZNF274 GTRD no Liver (HepG2) 108361871
chr19 2543098 2544362 ZNF274 GTRD no Liver (HepG2) 21836766
chr19 2543098 2544362 ZNF274 GTRD no Liver (HepG2) 108361872
chr19 2543098 2544362 ZNF274 GTRD no Liver (HepG2) 108361873
chr19 2543121 2544515 ZNF274 GTRD no Liver (HepG2) 21836767
chr19 2543121 2544515 ZNF274 GTRD no Liver (HepG2) 108361874
chr19 2543121 2544515 ZNF274 GTRD no Liver (HepG2) 108361875
chr19 2543148 2545171 TCF7L2 GTRD no Colon (HCT116) 21836768
chr19 2543148 2545171 TCF7L2 GTRD no Colon (HCT116) 108361876
chr19 2543148 2545171 TCF7L2 GTRD no Colon (HCT116) 108361877
chr19 2543156 2543166 ID4 JASPAR yes 112072203
chr19 2543157 2543166 SNAI2 JASPAR yes 112072204
chr19 2543158 2543163 USF2 TRANSFAC yes 112072205
chr19 2543160 2545653 ZNF274 GTRD no Blood (GM12878) 108361878
chr19 2543160 2545653 ZNF274 GTRD no Blood (GM12878) 108361879
chr19 2543160 2545653 ZNF274 GTRD no Blood (GM12878) 108361880
chr19 2543161 2544553 ZNF274 GTRD no Liver (HepG2) 21836769
chr19 2543161 2544553 ZNF274 GTRD no Liver (HepG2) 108361881
chr19 2543161 2544553 ZNF274 GTRD no Liver (HepG2) 108361882
chr19 2543162 2544501 ZNF274 GTRD no Liver (HepG2) 21836770
chr19 2543162 2544501 ZNF274 GTRD no Liver (HepG2) 108361883
chr19 2543162 2544501 ZNF274 GTRD no Liver (HepG2) 108361884
chr19 2543162 2544557 ZBTB33 GTRD no Lung (A549) 21836771
chr19 2543162 2544557 ZBTB33 GTRD no Lung (A549) 108361885
chr19 2543162 2544557 ZBTB33 GTRD no Lung (A549) 108361886
Genes associated with rs28434552[chr19:2543163], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More