EnhancerDB
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  3. rs28441261[chr19:6109577]
Enhancers that have rs28441261[chr19:6109577]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 6084063 6113078 enh17886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28441261[chr19:6109577]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 6108053 6110537 ZNF274 GTRD no Bone Marrow (K562) 21844676
chr19 6108053 6110537 ZNF274 GTRD no Bone Marrow (K562) 108377211
chr19 6108053 6110537 ZNF274 GTRD no Bone Marrow (K562) 108377212
chr19 6108198 6109816 ZNF274 GTRD no Bone Marrow (K562) 21844677
chr19 6108198 6109816 ZNF274 GTRD no Bone Marrow (K562) 108377213
chr19 6108198 6109816 ZNF274 GTRD no Bone Marrow (K562) 108377214
chr19 6108382 6110286 ZNF274 GTRD no Bone Marrow (K562) 21844679
chr19 6108382 6110286 ZNF274 GTRD no Bone Marrow (K562) 108377217
chr19 6108382 6110286 ZNF274 GTRD no Bone Marrow (K562) 108377218
chr19 6108391 6109717 ZNF274 GTRD no Blood (GM12878) 108377219
chr19 6108391 6109717 ZNF274 GTRD no Blood (GM12878) 108377220
chr19 6108470 6109746 ZNF143 GTRD no Epithelial (MCF-7) 21844681
chr19 6108470 6109746 ZNF143 GTRD no Epithelial (MCF-7) 108377223
chr19 6108470 6109746 ZNF143 GTRD no Epithelial (MCF-7) 108377224
chr19 6108478 6111119 ZNF274 GTRD no Bone Marrow (K562) 21844682
chr19 6108478 6111119 ZNF274 GTRD no Bone Marrow (K562) 108377225
chr19 6108478 6111119 ZNF274 GTRD no Bone Marrow (K562) 108377226
chr19 6108537 6109667 ZNF274 GTRD no Bone Marrow (K562) 21844689
chr19 6108537 6109667 ZNF274 GTRD no Bone Marrow (K562) 108377243
chr19 6108537 6109667 ZNF274 GTRD no Bone Marrow (K562) 108377244
chr19 6108549 6111179 TCF7L2 GTRD no Colon (HCT116) 21844690
chr19 6108549 6111179 TCF7L2 GTRD no Colon (HCT116) 108377247
chr19 6108549 6111179 TCF7L2 GTRD no Colon (HCT116) 108377248
chr19 6108588 6109723 ZBTB33 GTRD no Lung (A549) 21844697
chr19 6108588 6109723 ZBTB33 GTRD no Lung (A549) 108377261
chr19 6108588 6109723 ZBTB33 GTRD no Lung (A549) 108377262
chr19 6108588 6109746 ZNF274 GTRD no Bone Marrow (K562) 21844698
chr19 6108588 6109746 ZNF274 GTRD no Bone Marrow (K562) 108377263
chr19 6108588 6109746 ZNF274 GTRD no Bone Marrow (K562) 108377264
chr19 6108712 6109608 ZNF274 GTRD no Bone Marrow (K562) 21844711
chr19 6108712 6109608 ZNF274 GTRD no Bone Marrow (K562) 108377296
chr19 6108712 6109608 ZNF274 GTRD no Bone Marrow (K562) 108377297
chr19 6109222 6109577 ZNF274 GTRD no Bone Marrow (K562) 21844739
chr19 6109222 6109577 ZNF274 GTRD no Bone Marrow (K562) 108377373
chr19 6109571 6109589 TP63 JASPAR yes 112258681
Genes associated with rs28441261[chr19:6109577], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More