EnhancerDB
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  3. rs2844709[chr6:30717771]
Enhancers that have rs2844709[chr6:30717771]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2844709[chr6:30717771]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30716389 30717902 POLR2A UCSC Txn Factor no Conserved 108539495
chr6 30716389 30717902 POLR2A UCSC Txn Factor no Conserved 108539496
chr6 30717760 30717781 IRF1 JASPAR yes 101043991
chr6 30717763 30717777 IRF7 JASPAR yes 101043992
chr6 30717764 30717779 PRDM1 JASPAR yes 101043994
chr6 30717764 30717779 STAT2 JASPAR yes 101043995
chr6 30717764 30717782 IRF2 JASPAR yes 101043996
chr6 30717765 30717777 IRF1 JASPAR yes 101043997
Genes associated with rs2844709[chr6:30717771], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More