EnhancerDB
  1. Home
  2. SNP
  3. rs28454584[chr4:7883249]
Enhancers that have rs28454584[chr4:7883249]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 7872045 7899128 enh21351
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs28454584[chr4:7883249]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 7883238 7883251 SMAD2 JASPAR yes 88139484
chr4 7883243 7883251 TBX15 JASPAR yes 88139485
chr4 7883243 7883252 ZEB1 JASPAR yes 88139486
chr4 7883244 7883254 FIGLA JASPAR yes 88139487
chr4 7883244 7883254 TCF3 JASPAR yes 88139488
chr4 7883244 7883254 TCF4 JASPAR yes 88139489
chr4 7883245 7883254 SNAI2 JASPAR yes 88139490
chr4 7883246 7883251 USF2 TRANSFAC yes 88139491
Genes associated with rs28454584[chr4:7883249], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More