EnhancerDB
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  3. rs28459920[chr6:30723947]
Enhancers that have rs28459920[chr6:30723947]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs28459920[chr6:30723947]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30723930 30723950 RREB1 JASPAR yes 101044850
chr6 30723932 30723947 FOXP1 JASPAR yes 101044851
chr6 30723934 30723954 RREB1 JASPAR yes 101044853
chr6 30723935 30723955 RREB1 JASPAR yes 101044854
chr6 30723938 30723958 RREB1 JASPAR yes 101044855
chr6 30723939 30723959 RREB1 JASPAR yes 101044856
chr6 30723942 30723948 TCF4 TRANSFAC yes 101044857
chr6 30723942 30723954 FOXI1 JASPAR yes 101044858
chr6 30723942 30723957 FOXP1 JASPAR yes 101044859
chr6 30723942 30723962 RREB1 JASPAR yes 101044860
chr6 30723943 30723963 RREB1 JASPAR yes 101044861
chr6 30723946 30723958 FOXI1 JASPAR yes 101044862
Genes associated with rs28459920[chr6:30723947], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More