EnhancerDB
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  3. rs28463291[chr1:1618500]
Enhancers that have rs28463291[chr1:1618500]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs28463291[chr1:1618500]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1618495 1618507 FOXC2 JASPAR yes 26199207
chr1 1618496 1618508 FOXI1 JASPAR yes 26199208
chr1 1618497 1618511 ONECUT3 JASPAR yes 26199209
chr1 1618497 1618512 FOXP1 JASPAR yes 26199210
chr1 1618499 1618511 FOXC2 JASPAR yes 26199211
chr1 1618500 1618512 FOXI1 JASPAR yes 26199212
Genes associated with rs28463291[chr1:1618500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More