EnhancerDB
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  3. rs28464677[chr1:1616058]
Enhancers that have rs28464677[chr1:1616058]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs28464677[chr1:1616058]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1616045 1616058 NFKB1 JASPAR yes 26198811
chr1 1616045 1616058 NFKB2 JASPAR yes 26198812
chr1 1616053 1616063 SP1 JASPAR yes 26198813
Genes associated with rs28464677[chr1:1616058], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More