EnhancerDB
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  3. rs28473559[chr3:10240159]
Enhancers that have rs28473559[chr3:10240159]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 10220648 10240655 enh20318
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs28473559[chr3:10240159]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 10240158 10240169 E2F6 JASPAR yes 363655
chr3 10240158 10240171 SMAD2 JASPAR yes 363656
chr3 10240159 10240164 SP1 TRANSFAC yes 363657
Genes associated with rs28473559[chr3:10240159], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More