EnhancerDB
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  3. rs28479607[chr1:19333904]
Enhancers that have rs28479607[chr1:19333904]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19322701 19342495 enh11568
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs28479607[chr1:19333904]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19329398 19335367 ZNF274 GTRD no Blood (GM12878) 107802295
chr1 19333892 19333913 IRF1 JASPAR yes 27170345
chr1 19333895 19333909 IRF8 JASPAR yes 27170346
chr1 19333896 19333910 SPI1 JASPAR yes 27170347
chr1 19333900 19333910 ETV3 JASPAR yes 27170348
Genes associated with rs28479607[chr1:19333904], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More