EnhancerDB
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  3. rs28500475[chr17:1901001]
Enhancers that have rs28500475[chr17:1901001]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1888491 1923135 enh16929
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28500475[chr17:1901001]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1900988 1901001 TFAP2A JASPAR yes 52714638
chr17 1900988 1901001 TFAP2B JASPAR yes 52714639
chr17 1900988 1901001 TFAP2C JASPAR yes 52714640
chr17 1901000 1901021 ZNF263 JASPAR yes 52714642
Genes associated with rs28500475[chr17:1901001], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More