EnhancerDB
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  3. rs28520140[chr6:138132665]
Enhancers that have rs28520140[chr6:138132665]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 138109536 138156015 enh23663
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr6 138131886 138133298 vista1496
VISTA
chr6 138132277 138133056 vista53756
VISTA
Transcript factors that have rs28520140[chr6:138132665]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 138132430 138133120 POLR2A UCSC Txn Factor no Conserved 107693967
chr6 138132430 138133120 POLR2A UCSC Txn Factor no Conserved 108541864
chr6 138132430 138133120 POLR2A UCSC Txn Factor no Conserved 108541865
chr6 138132486 138132902 RELA UCSC Txn Factor no Conserved 107693968
chr6 138132486 138132902 RELA UCSC Txn Factor no Conserved 108541866
chr6 138132508 138132892 USF1 UCSC Txn Factor no Conserved 107693969
chr6 138132508 138132892 USF1 UCSC Txn Factor no Conserved 108541867
chr6 138132508 138132944 MAX UCSC Txn Factor no Conserved 107693970
chr6 138132508 138132944 MAX UCSC Txn Factor no Conserved 108541868
chr6 138132568 138132934 STAT3 UCSC Txn Factor no Conserved 107693971
chr6 138132568 138132934 STAT3 UCSC Txn Factor no Conserved 108541869
chr6 138132584 138132868 NR3C1 UCSC Txn Factor no Conserved 107693972
chr6 138132584 138132868 NR3C1 UCSC Txn Factor no Conserved 108541870
chr6 138132594 138132860 BHLHE40 UCSC Txn Factor no Conserved 107693973
chr6 138132594 138132860 BHLHE40 UCSC Txn Factor no Conserved 108541871
chr6 138132611 138132887 JUND UCSC Txn Factor no Conserved 107693974
chr6 138132611 138132887 JUND UCSC Txn Factor no Conserved 108541872
Genes associated with rs28520140[chr6:138132665], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More