EnhancerDB
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  3. rs28535017[chr15:99354149]
Enhancers that have rs28535017[chr15:99354149]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 99326765 99367158 enh44218
Colon (HCT116) Pancreas Uterus Kidney Stomach Ovary Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28535017[chr15:99354149]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 99354137 99354155 ESR1 JASPAR yes 25836276
chr15 99354145 99354153 TBX5 JASPAR yes 25836277
chr15 99354145 99354154 ZEB1 JASPAR yes 25836278
chr15 99354145 99354160 SCRT1 JASPAR yes 25836279
chr15 99354146 99354156 FIGLA JASPAR yes 25836280
chr15 99354146 99354156 ID4 JASPAR yes 25836281
chr15 99354146 99354156 MSC JASPAR yes 25836282
chr15 99354146 99354156 MYF6 JASPAR yes 25836283
chr15 99354146 99354156 TCF3 JASPAR yes 25836284
chr15 99354146 99354156 TCF4 JASPAR yes 25836285
chr15 99354147 99354156 SNAI2 JASPAR yes 25836286
chr15 99354147 99354160 SCRT2 JASPAR yes 25836287
chr15 99354148 99354153 USF2 TRANSFAC yes 25836288
chr15 99354149 99354155 PTF TRANSFAC yes 25836289
Genes associated with rs28535017[chr15:99354149], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More