EnhancerDB
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  3. rs28539397[chr3:124758697]
Enhancers that have rs28539397[chr3:124758697]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124748925 124773715 enh7498
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs28539397[chr3:124758697]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124758678 124758699 IRF1 JASPAR yes 5418411
chr3 124758683 124758698 FOXP1 JASPAR yes 5418414
chr3 124758685 124758705 RREB1 JASPAR yes 5418415
chr3 124758688 124758700 FOXC2 JASPAR yes 5418416
chr3 124758688 124758708 RREB1 JASPAR yes 5418417
chr3 124758693 124758713 RREB1 JASPAR yes 5418418
chr3 124758696 124758711 FOXP1 JASPAR yes 5418419
Genes associated with rs28539397[chr3:124758697], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More