EnhancerDB
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  3. rs28539993[chr15:63790662]
Enhancers that have rs28539993[chr15:63790662]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 63763165 63791495 enh16225
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs28539993[chr15:63790662]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 63790178 63790698 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21658964
chr15 63790178 63790698 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108144235
chr15 63790280 63790716 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21658965
chr15 63790394 63790674 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21658966
chr15 63790651 63790664 SMAD2 JASPAR yes 23984462
chr15 63790656 63790668 HES5 JASPAR yes 23984463
chr15 63790656 63790668 HES7 JASPAR yes 23984464
chr15 63790657 63790667 BHLHE40 JASPAR yes 23984465
chr15 63790657 63790667 CLOCK JASPAR yes 23984466
chr15 63790657 63790667 HEY1 JASPAR yes 23984467
chr15 63790657 63790667 HEY2 JASPAR yes 23984468
chr15 63790657 63790667 MAX JASPAR yes 23984469
chr15 63790657 63790667 MLXIPL JASPAR yes 23984470
chr15 63790657 63790667 MLX JASPAR yes 23984471
chr15 63790657 63790667 MNT JASPAR yes 23984472
chr15 63790657 63790667 TFE3 JASPAR yes 23984473
chr15 63790657 63790667 TFEB JASPAR yes 23984474
chr15 63790658 63790668 MAX JASPAR yes 23984475
chr15 63790659 63790664 MYC TRANSFAC yes 23984476
chr15 63790659 63790664 USF1 TRANSFAC yes 23984477
chr15 63790659 63790664 USF2 TRANSFAC yes 23984478
chr15 63790659 63790666 USF1 JASPAR yes 23984479
Genes associated with rs28539993[chr15:63790662], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More