EnhancerDB
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  3. rs28540769[chr10:30841047]
Enhancers that have rs28540769[chr10:30841047]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 30836165 30850415 enh13109
Bone Marrow (K562) Liver (HepG2) Large Intestine Esophagus Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs28540769[chr10:30841047]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 30840162 30841057 ZNF143 GTRD no Epithelial (MCF-7) 21426389
chr10 30840176 30841101 ZNF143 GTRD no Epithelial (MCF-7) 21426391
chr10 30840822 30841302 ZNF274 GTRD no Bone Marrow (K562) 21426405
chr10 30840822 30841302 ZNF274 GTRD no Bone Marrow (K562) 107907028
chr10 30841019 30841412 ZNF274 GTRD no Liver (HepG2) 21426406
chr10 30841019 30841412 ZNF274 GTRD no Liver (HepG2) 107907029
chr10 30841020 30841382 ZNF274 GTRD no Liver (HepG2) 21426407
chr10 30841020 30841382 ZNF274 GTRD no Liver (HepG2) 107907030
chr10 30841034 30841050 SOX4 JASPAR yes 126411965
chr10 30841042 30841686 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21426408
chr10 30841042 30841686 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107907031
chr10 30841043 30841054 FOXP2 JASPAR yes 126411966
chr10 30841045 30841053 FOXO3 JASPAR yes 126411967
chr10 30841045 30841062 BCL6B JASPAR yes 126411968
Genes associated with rs28540769[chr10:30841047], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More