EnhancerDB
  1. Home
  2. SNP
  3. rs28542504[chr17:41533416]
Enhancers that have rs28542504[chr17:41533416]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs28542504[chr17:41533416]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41532813 41533426 ZNF143 GTRD no Epithelial (MCF-7) 21760646
chr17 41533403 41533424 ZNF263 JASPAR yes 54349076
chr17 41533404 41533418 PLAG1 JASPAR yes 54349077
chr17 41533408 41533417 NKX2-8 JASPAR yes 54349078
chr17 41533408 41533418 NKX2-3 JASPAR yes 54349079
Genes associated with rs28542504[chr17:41533416], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More