EnhancerDB
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  3. rs28542963[chr17:55968014]
Enhancers that have rs28542963[chr17:55968014]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs28542963[chr17:55968014]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55968008 55968019 E2F1 JASPAR yes 54995524
chr17 55968009 55968014 SP1 TRANSFAC yes 54995525
chr17 55968011 55968019 E2F1 JASPAR yes 54995526
chr17 55968012 55968026 TLX1 JASPAR yes 54995527
Genes associated with rs28542963[chr17:55968014], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More