EnhancerDB
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  3. rs28543999[chr1:153497636]
Enhancers that have rs28543999[chr1:153497636]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28543999[chr1:153497636]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153497496 153497820 ZNF274 GTRD no Bone Marrow (K562) 21339711
chr1 153497621 153497639 NR3C1 JASPAR yes 32257161
chr1 153497632 153497647 MEF2C JASPAR yes 32257163
chr1 153497634 153497649 FOXP1 JASPAR yes 32257164
chr1 153497635 153497650 FOXP1 JASPAR yes 32257165
chr1 153497636 153497642 TBP TRANSFAC yes 32257166
chr1 153497636 153497651 FOXP1 JASPAR yes 32257167
chr1 153497636 153497657 IRF1 JASPAR yes 32257168
Genes associated with rs28543999[chr1:153497636], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More