EnhancerDB
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  3. rs28546404[chr4:7892822]
Enhancers that have rs28546404[chr4:7892822]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 7872045 7899128 enh21351
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs28546404[chr4:7892822]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 7892809 7892824 MEF2C JASPAR yes 88141117
chr4 7892809 7892830 IRF1 JASPAR yes 88141118
chr4 7892815 7892830 FOXP1 JASPAR yes 88141119
chr4 7892817 7892829 FOXC2 JASPAR yes 88141120
chr4 7892819 7892833 ONECUT2 JASPAR yes 88141121
chr4 7892819 7892833 ONECUT3 JASPAR yes 88141122
chr4 7892819 7892834 FOXP1 JASPAR yes 88141123
chr4 7892820 7892835 FOXA1 JASPAR yes 88141124
chr4 7892821 7892832 FOXB1 JASPAR yes 88141125
chr4 7892821 7892832 FOXC1 JASPAR yes 88141126
chr4 7892821 7892833 FOXC2 JASPAR yes 88141127
chr4 7892822 7892834 FOXI1 JASPAR yes 88141128
Genes associated with rs28546404[chr4:7892822], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More