EnhancerDB
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  3. rs28571899[chr1:19324533]
Enhancers that have rs28571899[chr1:19324533]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19322701 19342495 enh11568
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs28571899[chr1:19324533]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19323854 19324846 TCF7L2 GTRD no Colon (HCT116) 107802294
chr1 19324527 19324545 NR3C1 JASPAR yes 27168751
chr1 19324533 19324545 HNF1B JASPAR yes 27168752
Genes associated with rs28571899[chr1:19324533], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More