EnhancerDB
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  3. rs28572112[chr1:203492900]
Enhancers that have rs28572112[chr1:203492900]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs28572112[chr1:203492900]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203491557 203493112 ZNF143 GTRD no Epithelial (MCF-7) 21369215
chr1 203492885 203492900 FOXP1 JASPAR yes 34635289
chr1 203492886 203492901 FOXA1 JASPAR yes 34635291
chr1 203492887 203492907 RREB1 JASPAR yes 34635293
chr1 203492888 203492900 FOXI1 JASPAR yes 34635294
chr1 203492888 203492908 RREB1 JASPAR yes 34635295
chr1 203492891 203492911 RREB1 JASPAR yes 34635296
chr1 203492892 203492904 FOXI1 JASPAR yes 34635297
chr1 203492892 203492912 RREB1 JASPAR yes 34635298
chr1 203492893 203492908 FOXP1 JASPAR yes 34635299
chr1 203492896 203492908 FOXI1 JASPAR yes 34635300
Genes associated with rs28572112[chr1:203492900], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More