EnhancerDB
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  3. rs28606005[chr17:40397776]
Enhancers that have rs28606005[chr17:40397776]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs28606005[chr17:40397776]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40397764 40397777 NR2F1 JASPAR yes 54288803
chr17 40397766 40397777 ESRRA JASPAR yes 54288804
chr17 40397772 40397782 SREBF1 JASPAR yes 54288805
chr17 40397772 40397782 SREBF2 JASPAR yes 54288806
Genes associated with rs28606005[chr17:40397776], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More