EnhancerDB
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Enhancers that have rs28620867[chr17:56412576]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56410845 56419415 enh4498
Liver (HepG2) Epithelial (MCF-7) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
chr17 56412418 56413089 vista25287
VISTA
Transcript factors that have rs28620867[chr17:56412576]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275032
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275033
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275034
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275035
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275036
chr17 56399196 56418052 POLR2A UCSC Txn Factor no Conserved 108275037
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774005
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275067
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275068
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275069
chr17 56411714 56418052 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275070
chr17 56412393 56412829 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774007
chr17 56412393 56412829 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275072
chr17 56412434 56412834 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774008
chr17 56412434 56412834 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275073
chr17 56412503 56412939 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774009
chr17 56412503 56412939 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275074
chr17 56412515 56412759 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108275075
chr17 56412571 56413007 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21774010
chr17 56412571 56413007 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108275076
chr17 56412574 56412595 REST JASPAR yes 21262437
chr17 56412574 56412595 REST JASPAR yes 55012611
chr17 56412575 56412594 REST JASPAR yes 21262438
chr17 56412575 56412594 REST JASPAR yes 55012612
Genes associated with rs28620867[chr17:56412576], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More