EnhancerDB
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  3. rs28622407[chr17:39010574]
Enhancers that have rs28622407[chr17:39010574]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39001145 39015955 enh17144
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Muscle (A673) Placenta Colon (HCT116) Uterus Lung (PC-9) Breast Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr17 39010500 39010808 vista24758
VISTA
Transcript factors that have rs28622407[chr17:39010574]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39010325 39010895 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21756979
chr17 39010325 39010895 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108257848
chr17 39010387 39010963 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257849
chr17 39010396 39010776 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108257850
chr17 39010398 39010668 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257851
chr17 39010415 39010919 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257852
chr17 39010416 39010900 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257853
chr17 39010419 39010795 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21756980
chr17 39010419 39010795 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108257854
chr17 39010430 39010710 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108257855
chr17 39010432 39010722 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108257856
chr17 39010437 39010873 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257857
chr17 39010438 39010942 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756981
chr17 39010438 39010942 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257858
chr17 39010448 39010882 FOSL2 UCSC Txn Factor no Conserved 108257859
chr17 39010448 39010882 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257860
chr17 39010449 39010933 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257861
chr17 39010463 39010866 EP300 UCSC Txn Factor no Conserved 108257862
chr17 39010486 39010770 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257863
chr17 39010488 39010764 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257864
chr17 39010488 39010852 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257865
chr17 39010495 39010865 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756982
chr17 39010495 39010865 CEBPB UCSC Txn Factor no Conserved 108257866
chr17 39010495 39010865 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257867
chr17 39010497 39010845 JUN UCSC Txn Factor no Conserved 108257868
chr17 39010497 39010847 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257869
chr17 39010505 39010865 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257870
chr17 39010507 39010902 TCF12 UCSC Txn Factor no Conserved 108257871
chr17 39010507 39010902 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257872
chr17 39010511 39010851 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257873
chr17 39010512 39010842 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756983
chr17 39010512 39010842 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257874
chr17 39010516 39010806 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108257875
chr17 39010517 39010813 JUND UCSC Txn Factor no Conserved 108257876
chr17 39010517 39010813 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257877
chr17 39010517 39010853 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257878
chr17 39010522 39010866 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756984
chr17 39010522 39010866 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257879
chr17 39010533 39010814 FOS UCSC Txn Factor no Conserved 108257880
chr17 39010538 39010794 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257881
chr17 39010538 39010808 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257882
chr17 39010540 39010784 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257883
chr17 39010541 39010804 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756985
chr17 39010541 39010804 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257884
chr17 39010545 39011021 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108257885
chr17 39010552 39010788 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257886
chr17 39010557 39010941 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756986
chr17 39010557 39010941 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257887
chr17 39010564 39010794 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257888
chr17 39010564 39010820 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257889
chr17 39010565 39010823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756987
chr17 39010565 39010823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257890
chr17 39010567 39010738 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756988
chr17 39010567 39010738 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257891
chr17 39010567 39010783 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257892
chr17 39010569 39010746 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108257893
chr17 39010569 39010763 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108257894
chr17 39010573 39010578 H4TF1 TRANSFAC yes 21237255
chr17 39010573 39010578 H4TF1 TRANSFAC yes 54240853
chr17 39010573 39010584 CEBPB JASPAR yes 21237256
chr17 39010573 39010584 CEBPB JASPAR yes 54240854
chr17 39010574 39010585 CEBPA JASPAR yes 21237257
chr17 39010574 39010585 CEBPA JASPAR yes 54240855
Genes associated with rs28622407[chr17:39010574], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More