EnhancerDB
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  3. rs28623152[chr4:83710599]
Enhancers that have rs28623152[chr4:83710599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 83692085 83711830 enh8042
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs28623152[chr4:83710599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 83710583 83710602 CTCF JASPAR yes 90879218
chr4 83710594 83710605 HOXC11 JASPAR yes 90879220
chr4 83710594 83710605 HOXC12 JASPAR yes 90879221
chr4 83710594 83710605 HOXC13 JASPAR yes 90879222
chr4 83710594 83710605 HOXD12 JASPAR yes 90879223
chr4 83710595 83710605 HOXC10 JASPAR yes 90879224
chr4 83710595 83710605 HOXD11 JASPAR yes 90879225
Genes associated with rs28623152[chr4:83710599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More