EnhancerDB
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  3. rs28627368[chr1:153480457]
Enhancers that have rs28627368[chr1:153480457]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28627368[chr1:153480457]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153480271 153480661 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339452
chr1 153480296 153480620 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339453
chr1 153480455 153480467 HES5 JASPAR yes 32254478
chr1 153480455 153480467 HES7 JASPAR yes 32254479
chr1 153480456 153480466 CLOCK JASPAR yes 32254480
chr1 153480456 153480466 HEY1 JASPAR yes 32254481
chr1 153480456 153480466 HEY2 JASPAR yes 32254482
chr1 153480456 153480466 MAX JASPAR yes 32254483
chr1 153480456 153480466 MLXIPL JASPAR yes 32254484
chr1 153480456 153480466 MLX JASPAR yes 32254485
chr1 153480456 153480466 MNT JASPAR yes 32254486
chr1 153480456 153480466 TFE3 JASPAR yes 32254487
chr1 153480456 153480466 TFEB JASPAR yes 32254488
chr1 153480456 153480466 TFEC JASPAR yes 32254489
chr1 153480457 153480464 USF1 JASPAR yes 32254490
Genes associated with rs28627368[chr1:153480457], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More