EnhancerDB
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  3. rs28631763[chr19:13962287]
Enhancers that have rs28631763[chr19:13962287]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28631763[chr19:13962287]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13961555 13963254 TCF7L2 GTRD no Colon (HCT116) 21852649
chr19 13961693 13962353 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852654
chr19 13961742 13962404 ZNF274 GTRD no Blood (GM12878) 21852658
chr19 13961755 13962405 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852659
chr19 13961768 13962448 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852660
chr19 13961783 13964126 TCF7L2 GTRD no Colon (HCT116) 21852661
chr19 13961785 13963314 TCF7L2 GTRD no Colon (HCT116) 21852662
chr19 13961799 13962403 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852663
chr19 13961805 13964332 TCF7L2 GTRD no Colon (HCT116) 21852665
chr19 13961822 13964144 TCF7L2 GTRD no Colon (HCT116) 21852666
chr19 13961867 13962397 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852668
chr19 13961887 13962307 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852671
chr19 13961901 13962297 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852672
chr19 13961913 13962353 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852674
chr19 13961916 13962316 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852675
chr19 13961916 13962380 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852676
chr19 13961916 13963237 TCF7L2 GTRD no Colon (HCT116) 21852677
chr19 13961922 13962378 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852678
chr19 13961928 13962424 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852679
chr19 13961930 13962290 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852680
chr19 13961939 13962323 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852682
chr19 13961941 13962331 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852684
chr19 13961942 13962382 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852685
chr19 13961949 13962465 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852686
chr19 13961951 13962307 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21852687
chr19 13961953 13962329 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21852688
chr19 13961955 13962325 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852690
chr19 13961973 13962313 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852694
chr19 13961980 13962356 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852695
chr19 13961982 13962372 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852696
chr19 13962010 13962346 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852705
chr19 13962010 13962545 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852706
chr19 13962023 13962363 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852712
chr19 13962042 13962318 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852715
chr19 13962114 13962470 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852721
chr19 13962141 13962637 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852722
chr19 13962152 13963540 ZNF274 GTRD no Bone Marrow (K562) 21852723
chr19 13962189 13962493 ZNF274 GTRD no Blood (GM12878) 21852724
chr19 13962262 13962717 TCF7L2 GTRD no Colon (HCT116) 21852725
chr19 13962275 13962294 PAX5 JASPAR yes 112538464
chr19 13962284 13962303 CTCF JASPAR yes 112538465
chr19 13962286 13962292 NFE2 TRANSFAC yes 112538466
Genes associated with rs28631763[chr19:13962287], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More