EnhancerDB
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  3. rs28635904[chr16:85547347]
Enhancers that have rs28635904[chr16:85547347]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28635904[chr16:85547347]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85546318 85547633 ZNF143 GTRD no Epithelial (MCF-7) 21726687
chr16 85546332 85547624 ZNF143 GTRD no Epithelial (MCF-7) 21726688
chr16 85546333 85547635 ZNF143 GTRD no Epithelial (MCF-7) 21726689
chr16 85546380 85547621 ZNF143 GTRD no Epithelial (MCF-7) 21726690
chr16 85546404 85547437 ZNF143 GTRD no Epithelial (MCF-7) 21726692
chr16 85546422 85547515 ZNF143 GTRD no Epithelial (MCF-7) 21726693
chr16 85546457 85547919 ZNF143 GTRD no Epithelial (MCF-7) 21726694
chr16 85546493 85547484 ZNF143 GTRD no Epithelial (MCF-7) 21726696
chr16 85546496 85547684 ZNF143 GTRD no Epithelial (MCF-7) 21726697
chr16 85546504 85547450 ZNF143 GTRD no Epithelial (MCF-7) 21726698
chr16 85546506 85547511 ZNF143 GTRD no Epithelial (MCF-7) 21726699
chr16 85546560 85547502 ZNF143 GTRD no Epithelial (MCF-7) 21726700
chr16 85546564 85547413 ZNF143 GTRD no Epithelial (MCF-7) 21726701
chr16 85546595 85547522 ZNF143 GTRD no Epithelial (MCF-7) 21726702
chr16 85546633 85547626 ZNF274 GTRD no Liver (HepG2) 21726704
chr16 85546666 85547630 ZBTB33 GTRD no Lung (A549) 21726705
chr16 85546699 85547495 ZNF143 GTRD no Epithelial (MCF-7) 21726706
chr16 85546781 85547357 ZNF143 GTRD no Epithelial (MCF-7) 21726707
chr16 85546850 85547737 ZBTB33 GTRD no Lung (A549) 21726708
chr16 85546880 85547495 ZNF274 GTRD no Bone Marrow (K562) 21726709
chr16 85546880 85547526 ZNF274 GTRD no Liver (HepG2) 21726710
chr16 85546886 85547620 ZNF274 GTRD no Liver (HepG2) 21726711
chr16 85546887 85547555 ZNF274 GTRD no Cervix (HeLa-S3) 21726712
chr16 85546909 85547550 ZNF274 GTRD no Bone Marrow (K562) 21726713
chr16 85546911 85547703 ZNF274 GTRD no Liver (HepG2) 21726714
chr16 85546914 85547459 ZNF143 GTRD no Epithelial (MCF-7) 21726715
chr16 85546927 85547598 ZNF274 GTRD no Liver (HepG2) 21726716
chr16 85546959 85547642 ZNF274 GTRD no Bone Marrow (K562) 21726717
chr16 85546967 85547561 ZNF143 GTRD no Epithelial (MCF-7) 21726718
chr16 85546967 85547761 ZBTB33 GTRD no Lung (A549) 21726719
chr16 85546992 85547914 ZNF274 GTRD no Bone Marrow (K562) 21726720
chr16 85547020 85547686 ZBTB33 GTRD no Lung (A549) 21726722
chr16 85547095 85547628 ZNF274 GTRD no Bone Marrow (K562) 21726723
chr16 85547100 85547613 ZNF274 GTRD no Liver (HepG2) 21726724
chr16 85547106 85547697 ZNF274 GTRD no Liver (HepG2) 21726725
chr16 85547114 85547476 CTCF GTRD no Lung 21726726
chr16 85547115 85547483 ZNF274 GTRD no Cervix (HeLa-S3) 21726727
chr16 85547116 85547539 ZNF274 GTRD no Liver (HepG2) 21726728
chr16 85547127 85547485 ZNF274 GTRD no Bone Marrow (K562) 21726729
chr16 85547129 85547512 ZNF274 GTRD no Bone Marrow (K562) 21726730
chr16 85547144 85547593 ZNF274 GTRD no Cervix (HeLa-S3) 21726731
chr16 85547144 85547655 ZNF274 GTRD no Bone Marrow (K562) 21726732
chr16 85547172 85547621 ZNF143 GTRD no Epithelial (MCF-7) 21726733
chr16 85547177 85547508 ZNF274 GTRD no Bone Marrow (K562) 21726734
chr16 85547179 85547489 ZNF274 GTRD no Liver (HepG2) 21726735
chr16 85547198 85547614 ZNF274 GTRD no Bone Marrow (K562) 21726736
chr16 85547237 85547663 ZNF143 GTRD no Epithelial (MCF-7) 21726737
chr16 85547242 85547486 ZNF143 GTRD no Epithelial (MCF-7) 21726738
chr16 85547339 85547360 ZNF263 JASPAR yes 12070376
Genes associated with rs28635904[chr16:85547347], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More