EnhancerDB
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  3. rs28641045[chr16:89392093]
Enhancers that have rs28641045[chr16:89392093]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28641045[chr16:89392093]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89391362 89392351 P63 GTRD no Skin (Keratinocyte) 108225657
chr16 89392077 89392097 RREB1 JASPAR yes 12331455
chr16 89392086 89392101 RUNX2 JASPAR yes 12331456
chr16 89392089 89392095 SOX10 JASPAR yes 12331457
chr16 89392089 89392101 GLI2 JASPAR yes 12331458
chr16 89392090 89392100 RUNX3 JASPAR yes 12331459
chr16 89392091 89392100 RUNX2 JASPAR yes 12331460
Genes associated with rs28641045[chr16:89392093], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More