EnhancerDB
  1. Home
  2. SNP
  3. rs28650107[chr17:70602186]
Enhancers that have rs28650107[chr17:70602186]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70592834 70624575 enh32352
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs28650107[chr17:70602186]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70602176 70602187 NFKB1 JASPAR yes 55808046
chr17 70602177 70602187 REL JASPAR yes 55808047
chr17 70602177 70602188 NFKB1 JASPAR yes 55808048
chr17 70602178 70602188 REL JASPAR yes 55808049
Genes associated with rs28650107[chr17:70602186], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More