EnhancerDB
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  3. rs28662078[chr17:62999332]
Enhancers that have rs28662078[chr17:62999332]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28662078[chr17:62999332]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62998989 62999447 ZNF274 GTRD no Bone Marrow (K562) 21780993
chr17 62999313 62999333 RREB1 JASPAR yes 55338014
chr17 62999318 62999332 PLAG1 JASPAR yes 55338016
chr17 62999331 62999337 ZNF354C JASPAR yes 55338018
Genes associated with rs28662078[chr17:62999332], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More