EnhancerDB
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  3. rs28665968[chr17:38669170]
Enhancers that have rs28665968[chr17:38669170]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28665968[chr17:38669170]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38668704 38669220 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21754335
chr17 38669168 38669183 MEF2A JASPAR yes 54219706
chr17 38669170 38669182 MEF2A JASPAR yes 54219707
chr17 38669170 38669182 MEF2B JASPAR yes 54219708
chr17 38669170 38669182 MEF2D JASPAR yes 54219709
Genes associated with rs28665968[chr17:38669170], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More