EnhancerDB
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  3. rs28668389[chr3:58323942]
Enhancers that have rs28668389[chr3:58323942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58318801 58350235 enh7249
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs28668389[chr3:58323942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58323925 58323943 TP73 JASPAR yes 2686508
chr3 58323932 58323942 MAX JASPAR yes 2686509
chr3 58323932 58323943 USF2 JASPAR yes 2686510
chr3 58323932 58323944 HES5 JASPAR yes 2686511
chr3 58323942 58323946 NFE TRANSFAC yes 2686512
Genes associated with rs28668389[chr3:58323942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More