EnhancerDB
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  3. rs28689498[chr1:23882532]
Enhancers that have rs28689498[chr1:23882532]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23868685 23885215 enh126
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 23882500 23882866 vista746
VISTA
Transcript factors that have rs28689498[chr1:23882532]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23880452 23886457 POLR2A UCSC Txn Factor no Conserved 107802423
chr1 23880452 23886457 POLR2A UCSC Txn Factor no Conserved 107802424
chr1 23882520 23882536 POU4F3 JASPAR yes 27441557
chr1 23882520 23882536 POU4F3 JASPAR yes 118249558
chr1 23882521 23882532 FOSL2 JASPAR yes 27441558
chr1 23882521 23882532 JUNB JASPAR yes 27441559
chr1 23882521 23882532 FOSL2 JASPAR yes 118249559
chr1 23882521 23882532 JUNB JASPAR yes 118249560
chr1 23882522 23882533 FOSL1 JASPAR yes 27441560
chr1 23882522 23882533 JUND JASPAR yes 27441561
chr1 23882522 23882533 FOSL1 JASPAR yes 118249561
chr1 23882522 23882533 JUND JASPAR yes 118249562
chr1 23882523 23882532 JDP2 JASPAR yes 27441562
chr1 23882523 23882532 JDP2 JASPAR yes 118249563
chr1 23882527 23882536 VENTX JASPAR yes 27441563
chr1 23882527 23882536 VENTX JASPAR yes 118249564
Genes associated with rs28689498[chr1:23882532], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More