EnhancerDB
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Enhancers that have rs28703958[chr1:205289081]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205280105 205289755 enh12590
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs28703958[chr1:205289081]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205288624 205289128 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371778
chr1 205288624 205289128 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107862021
chr1 205288624 205289275 TCF7L2 UCSC Txn Factor no Conserved 107862022
chr1 205288679 205289275 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107862029
chr1 205288695 205289199 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107862032
chr1 205288721 205289091 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371788
chr1 205288721 205289091 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107862036
chr1 205288775 205289211 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107862039
chr1 205288815 205289135 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21371792
chr1 205288815 205289135 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107862043
chr1 205289061 205289081 RREB1 JASPAR yes 34754770
chr1 205289063 205289083 RREB1 JASPAR yes 34754771
chr1 205289065 205289085 RREB1 JASPAR yes 34754772
chr1 205289067 205289087 RREB1 JASPAR yes 34754773
chr1 205289069 205289089 RREB1 JASPAR yes 34754774
chr1 205289072 205289092 RREB1 JASPAR yes 34754775
chr1 205289077 205289097 RREB1 JASPAR yes 34754776
chr1 205289079 205289099 RREB1 JASPAR yes 34754777
chr1 205289080 205289100 RREB1 JASPAR yes 34754778
Genes associated with rs28703958[chr1:205289081], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More