EnhancerDB
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  3. rs28711927[chr17:62999266]
Enhancers that have rs28711927[chr17:62999266]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62953485 63000035 enh4531
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28711927[chr17:62999266]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62998989 62999447 ZNF274 GTRD no Bone Marrow (K562) 21780993
chr17 62999250 62999271 IRF1 JASPAR yes 55337998
chr17 62999253 62999274 IRF1 JASPAR yes 55338000
chr17 62999257 62999272 FOXP1 JASPAR yes 55338001
chr17 62999257 62999278 IRF1 JASPAR yes 55338002
chr17 62999258 62999273 FOXP1 JASPAR yes 55338003
chr17 62999259 62999274 FOXP1 JASPAR yes 55338004
chr17 62999260 62999275 FOXP1 JASPAR yes 55338005
chr17 62999261 62999276 FOXP1 JASPAR yes 55338006
chr17 62999262 62999277 FOXP1 JASPAR yes 55338007
chr17 62999263 62999278 FOXP1 JASPAR yes 55338008
Genes associated with rs28711927[chr17:62999266], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More