EnhancerDB
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  3. rs28739295[chr17:34222816]
Enhancers that have rs28739295[chr17:34222816]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 34213485 34236135 enh17119
Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs28739295[chr17:34222816]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 34222769 34223350 ZNF274 GTRD no Bone Marrow (K562) 108251386
chr17 34222772 34223566 SOX2 GTRD no Neural Stem Cells (H9) 21751096
chr17 34222772 34223566 SOX2 GTRD no Neural Stem Cells (H9) 108251387
chr17 34222811 34222825 GATA2 JASPAR yes 54020216
chr17 34222813 34222821 GATA3 JASPAR yes 54020217
chr17 34222813 34222821 GATA5 JASPAR yes 54020218
Genes associated with rs28739295[chr17:34222816], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More