EnhancerDB
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  3. rs28743001[chr17:38699779]
Enhancers that have rs28743001[chr17:38699779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28743001[chr17:38699779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38698729 38699962 ZNF274 GTRD no Liver (HepG2) 21755248
chr17 38698729 38699962 ZNF274 GTRD no Liver (HepG2) 108255739
chr17 38698740 38699897 ZNF274 GTRD no Liver (HepG2) 21755249
chr17 38698740 38699897 ZNF274 GTRD no Liver (HepG2) 108255740
chr17 38698820 38699817 ZNF274 GTRD no Liver (HepG2) 21755252
chr17 38698820 38699817 ZNF274 GTRD no Liver (HepG2) 108255745
chr17 38698829 38699836 ZNF274 GTRD no Blood (GM12878) 21755255
chr17 38698829 38699836 ZNF274 GTRD no Blood (GM12878) 108255747
chr17 38698973 38700029 ZBTB33 GTRD no Lung (A549) 108255767
chr17 38699130 38699815 ZNF274 GTRD no Liver (HepG2) 21755287
chr17 38699130 38699815 ZNF274 GTRD no Liver (HepG2) 108255788
chr17 38699144 38699814 ZNF274 GTRD no Liver (HepG2) 21755288
chr17 38699144 38699814 ZNF274 GTRD no Liver (HepG2) 108255789
chr17 38699165 38699790 ZNF274 GTRD no Liver (HepG2) 21755290
chr17 38699165 38699790 ZNF274 GTRD no Liver (HepG2) 108255791
chr17 38699209 38699804 ZNF274 GTRD no Bone Marrow (K562) 21755293
chr17 38699209 38699804 ZNF274 GTRD no Bone Marrow (K562) 108255794
chr17 38699218 38699781 ZNF274 GTRD no Liver (HepG2) 21755296
chr17 38699218 38699781 ZNF274 GTRD no Liver (HepG2) 108255797
chr17 38699265 38699817 ZNF274 GTRD no Liver (HepG2) 21755301
chr17 38699265 38699817 ZNF274 GTRD no Liver (HepG2) 108255802
chr17 38699770 38699781 DMRT3 JASPAR yes 54224259
Genes associated with rs28743001[chr17:38699779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More