EnhancerDB
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  3. rs28776797[chr17:38685326]
Enhancers that have rs28776797[chr17:38685326]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28776797[chr17:38685326]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38684420 38685456 ZNF274 GTRD no Liver (HepG2) 21754986
chr17 38685308 38685329 IRF1 JASPAR yes 54222094
chr17 38685311 38685326 FOXP1 JASPAR yes 54222096
chr17 38685312 38685327 FOXP1 JASPAR yes 54222098
chr17 38685313 38685328 FOXP1 JASPAR yes 54222099
chr17 38685313 38685334 IRF1 JASPAR yes 54222100
chr17 38685314 38685329 FOXP1 JASPAR yes 54222101
chr17 38685317 38685332 STAT2 JASPAR yes 54222102
chr17 38685321 38685336 IRF9 JASPAR yes 54222103
chr17 38685325 38685346 IRF1 JASPAR yes 54222104
Genes associated with rs28776797[chr17:38685326], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More