EnhancerDB
  1. Home
  2. SNP
  3. rs28780111[chr6:30720311]
Enhancers that have rs28780111[chr6:30720311]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 30720004 30720713 vista51531
VISTA
Transcript factors that have rs28780111[chr6:30720311]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30719927 30720795 POLR2A UCSC Txn Factor no Conserved 108539500
chr6 30720042 30720513 EP300 UCSC Txn Factor no Conserved 108539501
chr6 30720062 30720523 TFAP2A UCSC Txn Factor no Conserved 108539502
chr6 30720086 30720537 TFAP2C UCSC Txn Factor no Conserved 108539503
chr6 30720110 30720461 TCF12 UCSC Txn Factor no Conserved 108539504
chr6 30720166 30720524 STAT3 UCSC Txn Factor no Conserved 108539505
chr6 30720180 30720465 FOSL2 UCSC Txn Factor no Conserved 108539506
chr6 30720300 30720312 TFAP2A JASPAR yes 70343909
chr6 30720300 30720312 TFAP2B JASPAR yes 70343910
chr6 30720300 30720312 TFAP2C JASPAR yes 70343911
chr6 30720300 30720312 TFAP2A JASPAR yes 101044337
chr6 30720300 30720312 TFAP2B JASPAR yes 101044338
chr6 30720300 30720312 TFAP2C JASPAR yes 101044339
chr6 30720300 30720315 TFAP2A JASPAR yes 70343912
chr6 30720300 30720315 TFAP2C JASPAR yes 70343913
chr6 30720300 30720315 TFAP2A JASPAR yes 101044340
chr6 30720300 30720315 TFAP2C JASPAR yes 101044341
chr6 30720301 30720312 TFAP2A JASPAR yes 70343914
chr6 30720301 30720312 TFAP2A JASPAR yes 101044342
chr6 30720307 30720312 SP1 TRANSFAC yes 70343915
chr6 30720307 30720312 SP1 TRANSFAC yes 101044343
Genes associated with rs28780111[chr6:30720311], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More