EnhancerDB
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  3. rs28780420[chr1:153498976]
Enhancers that have rs28780420[chr1:153498976]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs28780420[chr1:153498976]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153498617 153499007 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339712
chr1 153498654 153499162 MYOD GTRD no Muscle (Myoblast) 21339713
chr1 153498767 153499023 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339715
chr1 153498772 153499048 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339716
Genes associated with rs28780420[chr1:153498976], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 153507075 153508720 - S100A6 ENSG00000197956.5 153508720 8099 Liver 0.0771091 1269
chr1 153920145 153931101 - CRTC2 ENSG00000160741.12 153931101 421169 Adrenal 0.417173 1286