EnhancerDB
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  3. rs28851182[chr1:19327635]
Enhancers that have rs28851182[chr1:19327635]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19322701 19342495 enh11568
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs28851182[chr1:19327635]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19327628 19327638 ID4 JASPAR yes 27169309
chr1 19327629 19327638 SNAI2 JASPAR yes 27169310
chr1 19327630 19327635 USF2 TRANSFAC yes 27169311
Genes associated with rs28851182[chr1:19327635], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 19230775 19283180 - IFFO2 ENSG00000169991.6 19283180 44455 Esophagus 0.0373698 255