EnhancerDB
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  3. rs28866281[chr16:89443362]
Enhancers that have rs28866281[chr16:89443362]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs28866281[chr16:89443362]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89443356 89443370 FOXF2 JASPAR yes 12338348
chr16 89443356 89443371 FOXP1 JASPAR yes 12338349
chr16 89443357 89443371 GATA2 JASPAR yes 12338350
chr16 89443359 89443367 GATA3 JASPAR yes 12338351
chr16 89443359 89443370 FOXP2 JASPAR yes 12338352
chr16 89443359 89443371 FOXI1 JASPAR yes 12338353
chr16 89443361 89443369 FOXG1 JASPAR yes 12338354
Genes associated with rs28866281[chr16:89443362], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More