EnhancerDB
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  3. rs28970385[chr16:29281963]
Enhancers that have rs28970385[chr16:29281963]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29265834 29287135 enh31760
Astrocyte Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs28970385[chr16:29281963]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29281666 29282344 ZNF143 GTRD no Epithelial (MCF-7) 21702085
chr16 29281840 29282123 ZNF143 GTRD no Epithelial (MCF-7) 21702086
chr16 29281881 29282158 ZNF143 GTRD no Epithelial (MCF-7) 21702087
chr16 29281883 29282153 ZNF143 GTRD no Epithelial (MCF-7) 21702088
chr16 29281963 29281969 ZNF354C JASPAR yes 10256352
chr16 29281963 29281983 RREB1 JASPAR yes 10256353
Genes associated with rs28970385[chr16:29281963], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More